DuckDB vs MongoDB

Choosing the right database is a critical choice when building any software application. All databases have different strengths and weaknesses when it comes to performance, so deciding which database has the most benefits and the most minor downsides for your specific use case and data model is an important decision. Below you will find an overview of the key concepts, architecture, features, use cases, and pricing models of DuckDB and MongoDB so you can quickly see how they compare against each other.

The primary purpose of this article is to compare how DuckDB and MongoDB perform for workloads involving time series data, not for all possible use cases. Time series data typically presents a unique challenge in terms of database performance. This is due to the high volume of data being written and the query patterns to access that data. This article doesn’t intend to make the case for which database is better; it simply provides an overview of each database so you can make an informed decision.

DuckDB Overview

DuckDB is an in-process SQL OLAP (Online Analytical Processing) database management system. It is designed to be simple, fast, and feature-rich. DuckDB can be used for processing and analyzing tabular datasets, such as CSV or Parquet files. It provides a rich SQL dialect with support for transactions, persistence, extensive SQL queries, and direct querying of Parquet and CSV files. DuckDB is built with a vectorized engine that is optimized for analytics and supports parallel query processing. It is designed to be easy to install and use, with no external dependencies and support for multiple programming languages.

MongoDB Overview

MongoDB is a popular, open-source NoSQL database launched in 2009. Designed to handle large volumes of unstructured and semi-structured data, MongoDB offers a flexible, schema-less data model, horizontal scalability, and high performance. Its ease of use, JSON-based document storage, and support for a wide range of programming languages have contributed to its widespread adoption across various industries and applications.

DuckDB for Time Series Data

DuckDB can be used effectively with time series data. It supports processing and analyzing tabular datasets, which can include time series data stored in CSV or Parquet files. With its optimized analytics engine and support for complex SQL queries, DuckDB can perform aggregations, joins, and other time series analysis operations efficiently. However, it’s important to note that DuckDB is not specifically designed for time series data management and may not have specialized features tailored for time series analysis like some dedicated time series databases.

MongoDB for Time Series Data

Although MongoDB is a general-purpose NoSQL database, it can be used for storing and processing time series data. The flexible data model of MongoDB allows for easy adaptation to the evolving structure of time series data, such as the addition of new metrics or the modification of existing ones. MongoDB provides built-in support for time-to-live (TTL) indexes, which automatically expire old data after a specified time period, making it suitable for managing large volumes of time series data with a limited storage capacity. MongoDB has also recently added a custom columnar storage engine and time series collection for time series use cases, meant to improve performance over the default MongoDB storage engine in terms of data compression and query performance.

DuckDB Key Concepts

• In-process: DuckDB operates in-process, meaning it runs within the same process as the application using it, without the need for a separate server.
• OLAP: DuckDB is an OLAP database, which means it is optimized for analytical query processing.
• Vectorized engine: DuckDB utilizes a vectorized engine that operates on batches of data, improving query performance.
• Transactions: DuckDB supports transactional operations, ensuring the atomicity, consistency, isolation, and durability (ACID) properties of data operations.
• SQL dialect: DuckDB provides a rich SQL dialect with advanced features such as arbitrary and nested correlated subqueries, window functions, collations, and support for complex types like arrays and structs

MongoDB Key Concepts

Some key terminology and concepts specific to MongoDB include:

• Database: A MongoDB database is a container for collections, which are groups of related documents.
• Collection: A collection in MongoDB is analogous to a table in relational databases, holding a set of documents.
• Document: A document in MongoDB is a single record, stored in a JSON-like format called BSON (Binary JSON). Documents within a collection can have different structures.
• Field: A field is a key-value pair within a document, similar to an attribute or column in a relational database.
• Index: An index in MongoDB is a data structure that improves the query performance on specific fields within a collection.

DuckDB Architecture

DuckDB follows an in-process architecture, running within the same process as the application. It is a relational table-oriented database management system that supports SQL queries for producing analytical results. DuckDB is built using C++11 and is designed to have no external dependencies. It can be compiled as a single file, making it easy to install and integrate into applications.

MongoDB Architecture

MongoDB’s architecture is centered around its flexible, document-based data model. As a NoSQL database, MongoDB supports a schema-less structure, which allows for the storage and querying of diverse data types, such as nested arrays and documents. MongoDB can be deployed as a standalone server, a replica set, or a sharded cluster. Replica sets provide high availability through automatic failover and data redundancy, while sharded clusters enable horizontal scaling and load balancing by distributing data across multiple servers based on a shard key.